MICRO Female Mosquito Class Definition

This is a female mosquito class definition for MICRO; it inherits (superclass) from MicroMosquito.

MicroMosquitoFemale

Format

An R6Class generator object

Fields

  • ID and Time

    • id: mosquito ID (integer)

    • bDay: time of emergence (numeric)

    • tNow: time of current behavioral state (numeric)

    • tNext: time to next behavioral state change (numeric)

    • genotype: genotype of mosquito (integer)

  • State and Location

    • state: current behavioral state of mosquito (character)

      • F: Blood Feeding Search Bout

      • B: Blood Feeding Attempt Bout

      • R: Post-Prandial Resting Bout

      • L: Egg Laying Search Bout

      • O: Egg Laying Attempt Bout

      • S: Sugar Feeding Attempt Bout

      • M: Female Mating Bout

      • E: Estivation Bout

      • D: Death

    • stateNew: next behavioral state of mosquito (see above)

    • inPointSet: class of site (character)

      • f: feeding site FeedingSite

      • l: aquatic habitat AquaticSite

      • s: sugar feeding site SugarSite

      • m: mating site MatingSite

    • ix: index of site (integer)

    • MATURE: mature (logical)

    • ALIVE: alive or dead? (logical)

  • Other State Fields

    • lspot: landing spot (character)

      • l: Leave the area

      • r: Reattempt Without Resting

      • v: Rest on vegetation

      • w: Rest on the Outside wall of a structure

      • i: Rest on the Inside wall of a structure

    • damage: wing tattering (numeric)

    • energy: energy reserves (numeric)

    • history: list; see MosquitoFemaleHistory

  • Egg Production

    • bmSize: the size of the blood meal, relative to max

    • batch: female eggs in batch

    • eggT: the minimum time before eggs are mature

    • eggP: the mimimum provision for eggs to mature

  • Maturation & Reproduction

    • sire: ID of mate

    • energyPreG: pre-gonotrophic energy requirement

    • hostID: the id of the host: -1 zoo, 0 null host, otherwise human ID

  • Pathogen Module Specific Fields

    • Pathogen: Module specific Pathogen object

Methods

  • Constructor

    • new: initialize a new MicroMosquitoFemale object

      • Arguments:

        • arg1: something.

  • Getters & Setters

    • get_id:

  • Pointers

    • get_FemalePopPointer: get pointer to enclosing MicroMosquitoPopFemale

    • set_FemalePopPointer: set pointer to enclosing MicroMosquitoPopFemale

    • get_MalePopPointer: get pointer to MicroMosquitoPopMale in same enclosing microsimulation Tile MicroTile

    • set_MalePopPointer: set pointer to MicroMosquitoPopMale in same enclosing microsimulation Tile MicroTile

    • get_LandscapePointer: get pointer to Landscape in same enclosing microsimulation Tile MicroTile

    • set_LandscapePointer: set pointer to Landscape in same enclosing microsimulation Tile MicroTile

    • get_HumansPointer: get pointer to HumanPop in same enclosing microsimulation Tile MicroTile

    • set_HumansPointer: set pointer to HumanPop in same enclosing microsimulation Tile MicroTile

    • get_TilePointer: get pointer to enclosing microsimulation Tile MicroTile

    • set_TilePointer: set pointer to enclosing microsimulation Tile MicroTile